Cytochrome b data of Mycopsylla species, 16S rDNA and atpD of Carsonella ruddii and 23S rDNA and 16S rDNA of S-endosymbiont harboured by M. fici, M. proxima and Mycopsylla sp. in Australia and New Zealand
  • Description

    The dataset contains alignments of sequences of Mycopsylla cytochrome b, Carsonella 16S rDNA, Carsonella atpD, S-endosymbiont 23S and 16S rDNA that were used to build phylogenetic trees. Individuals from three Mycopsylla spp. were collected in Australia and New Zealand in 2013 and 2014.

    Further information can be found in the associated files:
    n1. Insect_Collection_Details: this table contains the sample ID, the insect species, the insect host plant, the location, the latitude and longitude as well as the date the insect collection was made
    n2. Primer_Names: This table describes the primers used for amplification of the different gene fragments. CB1-CB2: Mycopsylla cytochrome b, Cru198F-Cru809R: Carsonella 16S rDNA, 2dS16SF-2dS16SR: S-endosymbiont 16S rDNA, 2dS23SF-2dS23SR: S-endosymbiont 23S rDNA, CatpD2013F-CatpD983R: Carsonella atpD

    Sequences were deposited in GenBank under accession numbers from KT273227 to KT273280. Raw sequences reads have been submitted to the NCBI SRA (sequence read archive) database under accession number SRP066532.

    Contact c.fromont@westernsydney.edu.au to discuss the data.


    • - Start
      Data publication title Cytochrome b data of Mycopsylla species, 16S rDNA and atpD of Carsonella ruddii and 23S rDNA and 16S rDNA of S-endosymbiont harboured by M. fici, M. proxima and Mycopsylla sp. in Australia and New Zealand
    • Description

      The dataset contains alignments of sequences of Mycopsylla cytochrome b, Carsonella 16S rDNA, Carsonella atpD, S-endosymbiont 23S and 16S rDNA that were used to build phylogenetic trees. Individuals from three Mycopsylla spp. were collected in Australia and New Zealand in 2013 and 2014.

      Further information can be found in the associated files:
      n1. Insect_Collection_Details: this table contains the sample ID, the insect species, the insect host plant, the location, the latitude and longitude as well as the date the insect collection was made
      n2. Primer_Names: This table describes the primers used for amplification of the different gene fragments. CB1-CB2: Mycopsylla cytochrome b, Cru198F-Cru809R: Carsonella 16S rDNA, 2dS16SF-2dS16SR: S-endosymbiont 16S rDNA, 2dS23SF-2dS23SR: S-endosymbiont 23S rDNA, CatpD2013F-CatpD983R: Carsonella atpD

      Sequences were deposited in GenBank under accession numbers from KT273227 to KT273280. Raw sequences reads have been submitted to the NCBI SRA (sequence read archive) database under accession number SRP066532.

      Contact c.fromont@westernsydney.edu.au to discuss the data.


      • Data type dataset
    • Keywords
      • phylogeny
      • endosymbiont
      • co-evolution
      • homotomid
      • psyllid
      • phylogeography
    • Funding source
    • Grant number(s)
      • -
      • FoR codes
      SEO codes
    - Coverage
      Temporal (time) coverage
    • Start date 2013/04/01
    • End date 2014/12/31
      • Time period
       
      Spatial (location,mapping) coverage
    • Locations
    - Data
    - Supplements
    • Related publications
        Name Phylogeographic analyses of bacterial endosymbionts in fig homotomids (Hemiptera: Psylloidea) reveal codiversification of both primary and secondary endosymbionts
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      • Notes
        • Name Relative abundance and strain diversity in the bacterial endosymbiont community of a sap-feeding insect across its native and introduced geographic range
      • URL http://doi.org/10.1007/s00248-017-0971-5
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    - License
      The data will be licensed under CC BY: Attribution 3.0 AU
    • Other license
      • Statement of rights in data Copyright Western Sydney University
    - Citation
      Citation Fromont, Caroline; Cook, James; Riegler, Markus; Sutton, Tim; DeGabriel, Jane; Quintans, Desi; Campany, Courtney (2016): Cytochrome b data of Mycopsylla species, 16S rDNA and atpD of Carsonella ruddii and 23S rDNA and 16S rDNA of S-endosymbiont harboured by M. fici, M. proxima and Mycopsylla sp. in Australia and New Zealand. Western Sydney University. https://doi.org/10.4225/35/57a957370f199

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